Integrative Genomic Enrichment Analysis Identified the Brain Regions and Development Stages Related to Anorexia Nervosa and Obsessive-Compulsive Disorder.
Authors: Cheng B, Qi X, Liang C, Zhang L, Ma M, Li P, Liu L, Cheng S, Yao Y, Chu X, Ye J, Wen Y, Jia Y, Zhang F
Journal: Cerebral cortex (New York, N.Y. : 1991)
anorexia nervosa
brain spatial feature
brain temporal feature
gene sets enrichment analysis
obsessive-compulsive disorder
Anorexia Nervosa
Brain
Gene Expression Regulation, Developmental
Genome-Wide Association Study
Genomics
Humans
Obsessive-Compulsive Disorder
Transcriptome
Abstract
Our aim is to explore the spatial and temporal features of anorexia nervosa (AN) and obsessive-compulsive disorder (OCD) considering different brain regions and development stages. The gene sets related to 16 brain regions and nine development stages were obtained from a brain spatial and temporal transcriptomic dataset. Using the genome-wide association study data, transcriptome-wide association study (TWAS) was conducted to identify the genes whose imputed expressions were associated with AN and OCD, respectively. The mRNA expression profiles were analyzed by GEO2R to obtain differentially expressed genes. Gene set enrichment analysis was conducted to detect the spatial and temporal features related to AN and OCD using the TWAS and mRNA expression analysis results. We observed multiple common association signals shared by TWAS and mRNA expression analysis of AN, such as the primary auditory cortex vs. cerebellar cortex in fetal development and earlier vs. later fetal development in the somatosensory cortex. For OCD, we also detected multiple common association signals, such as medial prefrontal cortex vs. amygdala in adulthood and fetal development vs. infancy in mediodorsal nucleus of thalamus. Our study provides novel clues for describing the spatial and temporal features of brain development in the pathogenesis of AN and OCD.